bam-server
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What is bam-server
How it works
Installation guidelines
BAM query API
Authorization protocol
Local database
Management API
Implementation examples
bam-server
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Welcome to bam-server’s documentation!
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Welcome to bam-server’s documentation!
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Contents
¶
What is bam-server
How it works
Installation guidelines
Requirements
Running in dev mode
Deployment
Configuration
Building from source
BAM query API
Authorization
API
BAM index
Range query
Using samtools
Reads in JSON format
Authorization protocol
HMAC protocol
RSA protocol
JWT example
Supported algorithms
Local database
Schema
Fields description
Some test data
Management API
Add/remove an app
Add/remove users
Add/remove samples
Add/remove an attribution
Implementation examples
Using IGV.js as reads viewer
Example of using Auth0 as authorization server
Indices and tables
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Index
Module Index
Search Page
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